GSE: GSE122551
GSE Title: The Spatio-Temporal Control of Zygotic Genome A...
Xenbase Article Id: XB-ART-56693
Pubmed Id: 31229896
Download Location: https://bigFrog.xenbase.org/xenbase/genomics/GEO/GSE122551/XENTR_10.0/RNA-Seq/
NGS Data: RNA-Seq
Folder Descriptions:
	BigWigs: .bw files in the folder represent binary format of mapped read intensity in the genome. These files can be used for visualization purposes.
	ExpressionFiles: Genes_TPM_Matrix.txt and Genes_Counts_Matrix.txt provide TPM and raw counts of genes across samples respectively.
	DE_Analysis: Differential Expression results between conditions. LogFC and FDR values can used to obtain differentially expressed genes.

Track #	Track Name	BigWig	Control Track #	DE-Analysis	GSMs
15469	Input WE - NF8	GSM3473722_15469.bw			GSM3473722
15468	Input WE - NF10.25	GSM3473723_15468.bw			GSM3473723
15480	WE - NF9	GSM3473736_15480.bw			GSM3473736,GSM3473737,GSM3473738
15478	WT + hbg1 cMO - NF10.25	GSM3473760_15478.bw			GSM3473760,GSM3473761,GSM3473762,GSM3473763
15477	WT + hbg1 cMO - NF11	GSM3473764_15477.bw			GSM3473764,GSM3473765,GSM3473766,GSM3473767
15476	WT + hbg1 cMO - NF12	GSM3473768_15476.bw			GSM3473768,GSM3473769,GSM3473770,GSM3473771
15466	WE - NF8	GSM3473720_15466.bw	15469	SRR8189092_vs_SRR8189090.txt	GSM3473720
15467	WE - NF10.25	GSM3473721_15467.bw	15468	SRR8189093_vs_SRR8189091.txt	GSM3473721
15479	WE + ctnnb1 MO - NF9	GSM3473724_15479.bw	15480	SRR8189106_vs_SRR8189094.txt	GSM3473724,GSM3473725,GSM3473726
15481	WE + ctnnb1 MO + SB431542 - NF9 	GSM3473727_15481.bw	15480	SRR8189106_vs_SRR8189097.txt	GSM3473727,GSM3473728,GSM3473729
15482	WE + ctnnb1 MO + LDN193189 - NF9	GSM3473730_15482.bw	15480	SRR8189106_vs_SRR8189100.txt	GSM3473730,GSM3473731,GSM3473732
15483	WE + ctnnb1 MO + LDN193189 + SB431542 - NF9	GSM3473733_15483.bw	15480	SRR8189106_vs_SRR8189103.txt	GSM3473733,GSM3473734,GSM3473735
15475	WE + SB431542 - NF9	GSM3473739_15475.bw	15480	SRR8189106_vs_SRR8189109.txt	GSM3473739,GSM3473740,GSM3473741
15473	WE + LDN193189 - NF9	GSM3473742_15473.bw	15480	SRR8189106_vs_SRR8189112.txt	GSM3473742,GSM3473743,GSM3473744
15474	WE + SB431542 + LDN193189 - NF9	GSM3473745_15474.bw	15480	SRR8189106_vs_SRR8189115.txt	GSM3473745,GSM3473746,GSM3473747
15470	WE + eomes MO + vegt MO + tbxt MO + tbxt.2 MO - NF10.25	GSM3473748_15470.bw	15478	SRR8189130_vs_SRR8189118.txt	GSM3473748,GSM3473749,GSM3473750,GSM3473751
15471	WE + eomes MO + vegt MO + tbxt MO + tbxt.2 MO - NF11	GSM3473752_15471.bw	15477	SRR8189134_vs_SRR8189122.txt	GSM3473752,GSM3473753,GSM3473754,GSM3473755
15472	WE + eomes MO + vegt MO + tbxt MO + tbxt.2 MO - NF12	GSM3473756_15472.bw	15476	SRR8189138_vs_SRR8189126.txt	GSM3473756,GSM3473757,GSM3473758,GSM3473759