GSE: GSE113186 GSE Title: The role of maternal pioneer factors in predefi... Xenbase Article Id: XB-ART-56302 Pubmed Id: 31537794 FTP Location: ftp:/xenbaseturbofrog.org/genomics/GEO5/GSE113186/XENTR_10.0/ChIP-Seq/ NGS Data: ChIP-Seq Folder Descriptions: BigWigs: .bw files in the folder represent binary format of mapped read intensity in the genome. These files can be used for visualization purposes. Called_Peaks: Peak calls per sample are obtained using MACS2 Track # Track Name BigWig Control Track # Called Peaks GSMs 15501 H3K4me1 WE - NF8 MBT GSM3099494_15501.bw 15560 GSM3099494_15501_broadPeaks.bed GSM3099494,GSM3099495 15500 H3K4me1 + pou5f3.2 MO + pou5f3.3 MO + sox3 MO - NF8 MBT GSM3099496_15500.bw 15560 GSM3099496_15500_broadPeaks.bed GSM3099496,GSM3099497 15557 input WE - NF6 GSM3099498_15557.bw GSM3099498_15557_narrowPeaks.bed GSM3099498 15558 input WE - NF7 GSM3099499_15558.bw GSM3099499_15558_narrowPeaks.bed GSM3099499 15559 input WE - NF8 GSM3099500_15559.bw GSM3099500_15559_narrowPeaks.bed GSM3099500,GSM3099501 15560 input WE - NF8 MBT GSM3099502_15560.bw GSM3099502_15560_narrowPeaks.bed GSM3099502,GSM3099503 15561 input WE - NF9 GSM3099504_15561.bw GSM3099504_15561_narrowPeaks.bed GSM3099504 15549 input WE - NF10 GSM3099505_15549.bw GSM3099505_15549_narrowPeaks.bed GSM3099505,GSM3099506,GSM3099507 15550 input WE - NF11 GSM3099508_15550.bw GSM3099508_15550_narrowPeaks.bed GSM3099508 15551 input WE - NF12 GSM3099509_15551.bw GSM3099509_15551_narrowPeaks.bed GSM3099509,GSM3099510 15552 input WE - NF13 GSM3099511_15552.bw GSM3099511_15552_narrowPeaks.bed GSM3099511 15553 input WE - NF20 GSM3099512_15553.bw GSM3099512_15553_narrowPeaks.bed GSM3099512 15555 input head - NF20 GSM3099513_15555.bw GSM3099513_15555_narrowPeaks.bed GSM3099513 15556 input trunk - NF20 GSM3099514_15556.bw GSM3099514_15556_narrowPeaks.bed GSM3099514 15554 input tail bud - NF20 GSM3099515_15554.bw GSM3099515_15554_narrowPeaks.bed GSM3099515 15523 Pol II WE - NF6 GSM3099452_15523.bw 15557 GSM3099452_15523_narrowPeaks.bed GSM3099452 15524 Pol II WE - NF7 GSM3099453_15524.bw 15558 GSM3099453_15524_narrowPeaks.bed GSM3099453 15528 Pol II WE - NF8 GSM3099454_15528.bw 15559 GSM3099454_15528_narrowPeaks.bed GSM3099454 15529 Pol II WE - NF8 MBT GSM3099455_15529.bw 15560 GSM3099455_15529_narrowPeaks.bed GSM3099455,GSM3099490,GSM3099491 15493 Pol II WE - NF11 GSM3099456_15493.bw 15550 GSM3099456_15493_narrowPeaks.bed GSM3099456 15521 Pol II WE - NF12 GSM3099457_15521.bw 15551 GSM3099457_15521_narrowPeaks.bed GSM3099457 15522 Pol II WE - NF13 GSM3099458_15522.bw 15552 GSM3099458_15522_narrowPeaks.bed GSM3099458 15511 Ctnnb1 WE - NF6 GSM3099459_15511.bw 15557 GSM3099459_15511_narrowPeaks.bed GSM3099459 15512 Ctnnb1 WE - NF8 GSM3099460_15512.bw 15559 GSM3099460_15512_narrowPeaks.bed GSM3099460 15513 Ctnnb1 WE - NF10 GSM3099461_15513.bw 15549 GSM3099461_15513_narrowPeaks.bed GSM3099461 15531 phospho-smad1/5/9 WE - NF8 MBT GSM3099462_15531.bw 15560 GSM3099462_15531_narrowPeaks.bed GSM3099462 15530 phospho-smad1/5/9 WE - NF10 GSM3099463_15530.bw 15549 GSM3099463_15530_narrowPeaks.bed GSM3099463,GSM3099464 15534 Smad2/3 WE - NF8 GSM3099465_15534.bw 15559 GSM3099465_15534_narrowPeaks.bed GSM3099465 15532 Smad2/3 WE - NF10 GSM3099466_15532.bw 15549 GSM3099466_15532_narrowPeaks.bed GSM3099466 15541 Sox3 WE - NF8 GSM3099467_15541.bw 15559 GSM3099467_15541_narrowPeaks.bed GSM3099467 15536 sox3 WE - NF10 GSM3099468_15536.bw 15549 GSM3099468_15536_narrowPeaks.bed GSM3099468 15537 sox3 WE - NF12 GSM3099469_15537.bw 15551 GSM3099469_15537_narrowPeaks.bed GSM3099469 15539 Sox3 head - NF20 GSM3099470_15539.bw 15555 GSM3099470_15539_narrowPeaks.bed GSM3099470 15540 Sox3 trunk - NF20 GSM3099471_15540.bw 15556 GSM3099471_15540_narrowPeaks.bed GSM3099471 15538 Sox3 tail bud - NF20 GSM3099472_15538.bw 15554 GSM3099472_15538_narrowPeaks.bed GSM3099472 15544 VegT WE - NF8 GSM3099473_15544.bw 15559 GSM3099473_15544_narrowPeaks.bed GSM3099473 15543 VegT WE - NF10 GSM3099474_15543.bw 15549 GSM3099474_15543_narrowPeaks.bed GSM3099474 15542 Tbx6 WE - NF20 GSM3099475_15542.bw 15553 GSM3099475_15542_narrowPeaks.bed GSM3099475 15502 Myod1 WE + myod1 - NF10 GSM3099476_15502.bw 15549 GSM3099476_15502_narrowPeaks.bed GSM3099476,GSM3099477 15508 sox3 WE + myod1 - NF10 GSM3099478_15508.bw 15549 GSM3099478_15508_narrowPeaks.bed GSM3099478,GSM3099479 15503 Pol II WE + myod1 - NF10 GSM3099480_15503.bw 15549 GSM3099480_15503_narrowPeaks.bed GSM3099480,GSM3099481 15533 Smad2/3 WE - NF8 MBT GSM3099482_15533.bw 15560 GSM3099482_15533_narrowPeaks.bed GSM3099482,GSM3099483 15535 Smad2/3 WE + pou5f3.2 MO + pou5f3.3 MO + sox3 MO - NF8 MBT GSM3099484_15535.bw 15560 GSM3099484_15535_narrowPeaks.bed GSM3099484,GSM3099485 15509 Ctnnb1 WE - NF9 GSM3099486_15509.bw 15561 GSM3099486_15509_narrowPeaks.bed GSM3099486,GSM3099487 15510 Ctnnb1 WE + pou5f3.2 MO + pou5f3.3 MO + sox3 MO - NF9 GSM3099488_15510.bw 15561 GSM3099488_15510_narrowPeaks.bed GSM3099488,GSM3099489 15504 Pol II WE + pou5f3.2 MO + pou5f3.3 MO + sox3 MO - NF8 MBT GSM3099492_15504.bw 15560 GSM3099492_15504_narrowPeaks.bed GSM3099492,GSM3099493