GSE: GSE118024
GSE Title: Endodermal maternal transcription factors estab...
Xenbase Article Id: XB-ART-55999
Pubmed Id: 31167141
Download Location: https://bigFrog.xenbase.org/xenbase/genomics/GEO/GSE118024/XENTR_10.0/RNA-Seq/
NGS Data: RNA-Seq
Folder Descriptions:
	BigWigs: .bw files in the folder represent binary format of mapped read intensity in the genome. These files can be used for visualization purposes.
	ExpressionFiles: Genes_TPM_Matrix.txt and Genes_Counts_Matrix.txt provide TPM and raw counts of genes across samples respectively.
	DE_Analysis: Differential Expression results between conditions. LogFC and FDR values can used to obtain differentially expressed genes.

Track #	Track Name	BigWig	Control Track #	DE-Analysis	GSMs
22583	WE - NF4	GSM3317420_22583.bw			GSM3317420,GSM3317421,GSM3317422
22584	animal cap - animal cap explant - NF10.5	GSM3317423_22584.bw			GSM3317423,GSM3317431
22592	vegetal yolk mass - vegetal yolk mass explant - NF10.5	GSM3317439_22592.bw			GSM3317439,GSM3317443
22581	animal blastomere - NF4	GSM3317414_22581.bw	22583	SRR7637655_vs_SRR7637649.txt	GSM3317414,GSM3317415,GSM3317416
22582	vegetal blastomere - NF4	GSM3317417_22582.bw	22583	SRR7637655_vs_SRR7637652.txt	GSM3317417,GSM3317418,GSM3317419
22586	animal cap - vegt + animal cap explant - NF10.5	GSM3317424_22586.bw	22584	SRR7637658_vs_SRR7637659.txt	GSM3317424,GSM3317432
22585	animal cap - vegt + animal cap explant - NF10.5	GSM3317425_22585.bw	22584	SRR7637658_vs_SRR7637660.txt	GSM3317425,GSM3317433
22587	animal cap - vegt + animal cap explant - NF10.5	GSM3317426_22587.bw	22584	SRR7637658_vs_SRR7637661.txt	GSM3317426,GSM3317434
22588	animal cap - vegt + animal cap explant - NF10.5	GSM3317427_22588.bw	22584	SRR7637658_vs_SRR7637662.txt	GSM3317427,GSM3317435
22589	animal cap - vegt + otx1 + animal cap explant - NF10.5	GSM3317428_22589.bw	22584	SRR7637658_vs_SRR7637663.txt	GSM3317428,GSM3317436
22590	animal cap - otx1 + vegt + animal cap explant - NF10.5	GSM3317429_22590.bw	22584	SRR7637658_vs_SRR7637664.txt	GSM3317429,GSM3317437
22591	animal cap - vegt + otx1 + animal cap explant - NF10.5	GSM3317430_22591.bw	22584	SRR7637658_vs_SRR7637665.txt	GSM3317430,GSM3317438
22594	vegetal yolk mass - vegt MO + vegetal yolk mass explant - NF10.5	GSM3317440_22594.bw	22592	SRR7637674_vs_SRR7637675.txt	GSM3317440,GSM3317444
22595	vegetal yolk mass - otx1 MO + vegetal yolk mass explant - NF10.5	GSM3317441_22595.bw	22592	SRR7637674_vs_SRR7637676.txt	GSM3317441,GSM3317445
22596	vegetal yolk mass - vegt MO + otx1 MO + vegetal yolk mass explant - NF10.5	GSM3317442_22596.bw	22592	SRR7637674_vs_SRR7637677.txt	GSM3317442,GSM3317446