GSE: GSE161600
GSE Title: Uncovering the mesendoderm gene regulatory netw...
Xenbase Article Id: XB-ART-58965
Pubmed Id: 35172134
Download Location: https://bigFrog.xenbase.org/xenbase/genomics/GEO/GSE161600/XENTR_10.0/RNA-Seq/
NGS Data: RNA-Seq
Folder Descriptions:
	BigWigs: .bw files in the folder represent binary format of mapped read intensity in the genome. These files can be used for visualization purposes.
	ExpressionFiles: Genes_TPM_Matrix.txt and Genes_Counts_Matrix.txt provide TPM and raw counts of genes across samples respectively.
	DE_Analysis: Differential Expression results between conditions. LogFC and FDR values can used to obtain differentially expressed genes.

Track #	Track Name	BigWig	Control Track #	DE-Analysis	GSMs
24300	WE - NF9	GSM4910712_24300.bw			GSM4910712,GSM4910713
24301	WE - NF10	GSM4910714_24301.bw			GSM4910714,GSM4910715
24302	WE - NF10.5	GSM4910716_24302.bw			GSM4910716,GSM4910717
24303	WE + tcf7l1 MO - NF9	GSM4910706_24303.bw	24300	SRR13071754_vs_SRR13071748.txt	GSM4910706,GSM4910707
24304	WE + tcf7l1 MO - NF10	GSM4910708_24304.bw	24301	SRR13071757_vs_SRR13071750.txt	GSM4910708,GSM4910709
24305	WE + tcf7l1 MO - NF10.5	GSM4910710_24305.bw	24302	SRR13071759_vs_SRR13071752.txt	GSM4910710,GSM4910711