GSE: GSE89271
GSE Title: RNAseq and ChIPseq profiling of Foxn4 and Foxj1...
Xenbase Article Id: XB-ART-52793
Pubmed Id: 27864379
Download Location: https://bigFrog.xenbase.org/xenbase/genomics/GEO/GSE89271/XENLA_10.1/RNA-Seq/
NGS Data: RNA-Seq
Folder Descriptions:
	BigWigs: .bw files in the folder represent binary format of mapped read intensity in the genome. These files can be used for visualization purposes.
	ExpressionFiles: Genes_TPM_Matrix.txt and Genes_Counts_Matrix.txt provide TPM and raw counts of genes across samples respectively.
	DE_Analysis: Differential Expression results between conditions. LogFC and FDR values can used to obtain differentially expressed genes.

Track #	Track Name	BigWig	Control Track #	DE-Analysis	GSMs
1029	animal cap + mcidas + foxj1 CRISPR - NF18	GSM2363456_1029.bw			GSM2363456,GSM2363457
1031	animal cap + mcidas + foxn4 CRISPR - NF18	GSM2363458_1031.bw			GSM2363458,GSM2363459
1026	animal cap + mcidas + foxn4 MO - NF18	GSM2363460_1026.bw			GSM2363460,GSM2363461
1030	animal cap + mcidas - NF18	GSM2364660_1030.bw			GSM2364660,GSM2364661,GSM2364662