GSE: GSE93195
GSE Title: Spemann organizer transcriptome induction by ea...
Xenbase Article Id: XB-ART-53589
Pubmed Id: 28348214
Download Location: https://bigFrog.xenbase.org/xenbase/genomics/GEO/GSE93195/XENLA_10.1/RNA-Seq/
NGS Data: RNA-Seq
Folder Descriptions:
	BigWigs: .bw files in the folder represent binary format of mapped read intensity in the genome. These files can be used for visualization purposes.
	ExpressionFiles: Genes_TPM_Matrix.txt and Genes_Counts_Matrix.txt provide TPM and raw counts of genes across samples respectively.
	DE_Analysis: Differential Expression results between conditions. LogFC and FDR values can used to obtain differentially expressed genes.

Track #	Track Name	BigWig	Control Track #	DE-Analysis	GSMs
1136	WE - NF10.5	GSM2446097_1136.bw			GSM2446097,GSM2446102,GSM2446107,GSM2446117,GSM2446120,GSM2446123
1138	WE - NF9	GSM2446126_1138.bw			GSM2446126,GSM2446129,GSM2446132,GSM2446135,GSM2446139
1140	WE + ctnnb1 MO - NF10.5	GSM2446098_1140.bw	1136	SRR5146641_vs_SRR5146642.txt	GSM2446098,GSM2446103,GSM2446108
1133	WE + LiCl - NF10.5	GSM2446099_1133.bw	1136	SRR5146641_vs_SRR5146643.txt	GSM2446099,GSM2446109
1130	dorsal WE - dorsal explant - NF10.5	GSM2446100_1130.bw	1136	SRR5146641_vs_SRR5146644.txt	GSM2446100,GSM2446105,GSM2446111,GSM2446113,GSM2446115
1137	ventral WE - ventral explant - NF10.5	GSM2446101_1137.bw	1136	SRR5146641_vs_SRR5146645.txt	GSM2446101,GSM2446106,GSM2446112,GSM2446114,GSM2446116
1135	WE + sia1 - NF10.5	GSM2446104_1135.bw	1136	SRR5146641_vs_SRR5146648.txt	GSM2446104,GSM2446110
1131	WE + wnt8a - NF10.5	GSM2446118_1131.bw	1136	SRR5146641_vs_SRR5146662.txt	GSM2446118,GSM2446121,GSM2446124
1134	WE + cer1 - NF10.5	GSM2446119_1134.bw	1136	SRR5146641_vs_SRR5146663.txt	GSM2446119,GSM2446122,GSM2446125
1141	WE + wnt8a - NF9	GSM2446127_1141.bw	1138	SRR5146670_vs_SRR5146671.txt	GSM2446127,GSM2446130,GSM2446133
1132	WE + cer1 - NF9	GSM2446128_1132.bw	1138	SRR5146670_vs_SRR5146672.txt	GSM2446128,GSM2446131,GSM2446134
1128	WE + ctnnb1 MO - NF9	GSM2446136_1128.bw	1138	SRR5146670_vs_SRR5146680.txt	GSM2446136,GSM2446140
1129	WE + LiCl - NF9	GSM2446137_1129.bw	1138	SRR5146670_vs_SRR5146681.txt	GSM2446137,GSM2446141
1139	WE + sia1 - NF9	GSM2446138_1139.bw	1138	SRR5146670_vs_SRR5146682.txt	GSM2446138,GSM2446142