GSE: GSE124563
GSE Title: Transcriptome analysis of regeneration in Xenop...
Xenbase Article Id: XB-ART-56074
Pubmed Id: 31250914
Download Location: https://bigFrog.xenbase.org/xenbase/genomics/GEO/GSE124563/XENLA_10.1/RNA-Seq/
NGS Data: RNA-Seq
Folder Descriptions:
	BigWigs: .bw files in the folder represent binary format of mapped read intensity in the genome. These files can be used for visualization purposes.
	ExpressionFiles: Genes_TPM_Matrix.txt and Genes_Counts_Matrix.txt provide TPM and raw counts of genes across samples respectively.
	DE_Analysis: Differential Expression results between conditions. LogFC and FDR values can used to obtain differentially expressed genes.

Track #	Track Name	BigWig	Control Track #	DE-Analysis	GSMs
22734	WE - NF10.5	GSM3536579_22734.bw			GSM3536579,GSM3536584,GSM3536589
22735	WE - NF12	GSM3536594_22735.bw			GSM3536594,GSM3536599,GSM3536604
22741	left side explant - NF10.5	GSM3536580_22741.bw	22734	SRR8384741_vs_SRR8384742.txt	GSM3536580,GSM3536585,GSM3536590
22742	right side explant - NF10.5	GSM3536581_22742.bw	22734	SRR8384741_vs_SRR8384743.txt	GSM3536581,GSM3536586,GSM3536591
22737	dorsal explant - NF10.5	GSM3536582_22737.bw	22734	SRR8384741_vs_SRR8384744.txt	GSM3536582,GSM3536587,GSM3536592
22738	ventral explant - NF10.5	GSM3536583_22738.bw	22734	SRR8384741_vs_SRR8384745.txt	GSM3536583,GSM3536588,GSM3536593
22740	left side explant - NF12	GSM3536595_22740.bw	22735	SRR8384756_vs_SRR8384757.txt	GSM3536595,GSM3536600,GSM3536605
22743	right side explant - NF12	GSM3536596_22743.bw	22735	SRR8384756_vs_SRR8384758.txt	GSM3536596,GSM3536601,GSM3536606
22736	dorsal explant - NF12	GSM3536597_22736.bw	22735	SRR8384756_vs_SRR8384759.txt	GSM3536597,GSM3536602,GSM3536607
22739	ventral explant - NF12	GSM3536598_22739.bw	22735	SRR8384756_vs_SRR8384760.txt	GSM3536598,GSM3536603,GSM3536608