GSE: GSE53653
GSE Title: Genome-wide view of TGFb/Foxh1 regulation of th...
Xenbase Article Id: XB-ART-49634
Pubmed Id: 25359723
Download Location: https://bigFrog.xenbase.org/xenbase/genomics/GEO/GSE53653/XENTR_10.0/RNA-Seq/
NGS Data: RNA-Seq
Folder Descriptions:
	BigWigs: .bw files in the folder represent binary format of mapped read intensity in the genome. These files can be used for visualization purposes.
	ExpressionFiles: Genes_TPM_Matrix.txt and Genes_Counts_Matrix.txt provide TPM and raw counts of genes across samples respectively.
	DE_Analysis: Differential Expression results between conditions. LogFC and FDR values can used to obtain differentially expressed genes.

Track #	Track Name	BigWig	Control Track #	DE-Analysis	GSMs
1829	WE - NF10.5	GSM1298097_1829.bw			GSM1298097
1819	WE + EtOH - NF10.5	GSM1298095_1819.bw	1829	SRR1060751_vs_SRR1060749.txt	GSM1298095
1660	WE + SB431542 - NF10.5	GSM1298096_1660.bw	1829	SRR1060751_vs_SRR1060750.txt	GSM1298096
1656	WE + foxh1 MO - NF10.5	GSM1298098_1656.bw	1829	SRR1060751_vs_SRR1060752.txt	GSM1298098